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ar9av / paper-writing-bench

Reverse-engineer raw materials (Sparse idea, Dense idea, experimental log) from an existing AI research paper to build a benchmark case for evaluating paper-writing pipelines. Replicates the PaperWritingBench dataset construction procedure from arXiv:2604.05018 §3 / App. C. TRIGGER when the user asks to "build a benchmark case from this paper", "reverse-engineer raw materials", or "evaluate my pipeline against PaperWritingBench".

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SKILL.md
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PaperWritingBench (§3)

Faithful implementation of the PaperWritingBench dataset construction
procedure from PaperOrchestra (Song et al., 2026, arXiv:2604.05018, §3 and
App. C, F.2).

The original benchmark contains 200 papers (100 CVPR 2025 + 100 ICLR 2025).
For each paper, the authors reverse-engineer the (I, E) tuple by stripping
narrative flow from the original PDF using the three prompts in App. F.2.
You can use this skill to reverse-engineer your own benchmark cases from
any paper PDF.

What this skill does

Given an existing AI research paper (PDF or markdown extract), produce:

  • idea.md (Sparse variant) — high-level concept note, no math, no
    experimental results

  • idea.md (Dense variant) — detailed technical proposal with LaTeX
    equations and variable definitions, but still no experimental results

  • experimental_log.md — exhaustive raw experimental setup, numeric data,
    and qualitative observations, with all narrative references stripped

These three files form a complete (I, E) input pair for the
paper-orchestra pipeline. You can then run the pipeline and compare its
output to the original paper using paper-autoraters.

Inputs

  • A paper PDF or extracted markdown text. The paper uses MinerU
    (Wang et al., 2024) for PDF→markdown extraction; you (the host agent)
    should use whatever PDF extractor your environment provides.

  • For controlled experiments, you may also extract figures separately
    (PDFFigures 2.0 in the paper).

Outputs

  • bench/<paper_id>/idea_sparse.md — Sparse variant
  • bench/<paper_id>/idea_dense.md — Dense variant
  • bench/<paper_id>/experimental_log.md — Experimental log

Workflow

For each paper, run three independent LLM calls using the verbatim prompts
below:

1. Sparse idea generation

Load references/sparse-idea-prompt.md. Pass the paper text (or
markdown extract) as {paper_content}. The prompt instructs the model to:

  • Stop extracting at empirical verification (no Experiments / Results / Comparisons)
  • Use first-person future tense ("We propose to explore...")
  • Avoid LaTeX math; describe components by function
  • Anonymize authors and titles

Output: idea_sparse.md with the four sections (Problem Statement, Core
Hypothesis, Proposed Methodology high-level, Expected Contribution).

2. Dense idea generation

Load references/dense-idea-prompt.md. Same input. The prompt instructs
the model to:

  • Preserve mathematical formulations using LaTeX
  • Define every variable used in equations
  • Include specific architectural choices and dimensions
  • Same exclusion zone (no experiments)

Output: idea_dense.md with the four sections (Problem Statement, Core
Hypothesis, Proposed Methodology detailed, Expected Contribution).

3. Experimental log generation

Load references/experimental-log-prompt.md. Same input. The prompt
instructs the model to:

  • Use past-tense persona ("We ran...", "The results were...")
  • Strip all references to figure/table numbers
  • Deconstruct tables into raw numeric data
  • Log figure findings as factual observations
  • Anonymize authors

Output: experimental_log.md with sections for Setup, Raw Numeric Data,
and Qualitative Observations.

Critical rules from the prompts

These are excerpted from App. F.2. The host agent MUST honor them:

  • No citations. None of the three outputs may contain \cite,
    reference numbers, or author names from the source paper.

  • No URLs. Strip all hyperlinks.
  • Anonymize. Author identities, affiliations, acknowledgements all
    removed.

  • Self-contained. Each file must make sense without the original paper.
  • No experimental leakage in idea files. The Sparse and Dense ideas
    must stop where empirical verification begins. They describe what will
    be done, not what was done.

  • No table/figure references in experimental log. No "as shown in
    Table 1", "see Fig. 5". The downstream paper-orchestra pipeline will
    generate its own figures and tables — the log must not assume any
    particular ones exist.

  • 100% numeric accuracy in experimental log. This becomes the ground
    truth for the section-writing-agent and content-refinement-agent's
    hallucination check.

How the bench is used

After producing (idea_sparse.md, idea_dense.md, experimental_log.md) for
a paper:

  1. Pick a variant (Sparse or Dense) — the paper ablates both, with Dense
    producing more rigorous methodology and Sparse exercising the system's
    robustness on under-specified inputs.

  2. Drop the chosen idea.md, plus experimental_log.md, plus a
    template.tex for the target conference, plus a
    conference_guidelines.md, into a paper-orchestra workspace.

  3. Run the pipeline.
  4. Compare the generated paper against the original using
    paper-autoraters (citation F1, lit review quality, SxS paper quality).

Resources

  • references/bench-overview.md — the 200-paper bench, venue cutoffs, sizes
  • references/sparse-idea-prompt.md — verbatim from App. F.2
  • references/dense-idea-prompt.md — verbatim from App. F.2
  • references/experimental-log-prompt.md — verbatim from App. F.2